This explains why some people can drink coffee and fall fast asleep

Content reviewed by Donna Gates
Written by Body Ecology on December 6th, 2021

Ever wonder how some people can down an espresso right before bed and sleep like a baby, while others have a half-caf latte first thing and still feel jittery at night? Like many things, how you metabolize coffee (well, caffeine) is massively influenced by your genes.

Some people could have caffeine lingering in their system up to 22 hours after a single cup of coffee.

The CYP1A2 gene gets most of the attention when it comes to caffeine metabolism, but there’s another gene, AHR, worthy of scrutiny too. AHR is also an interesting gene for anyone curious about the detoxification of xenobiotics, so be sure to keep reading for a good grounding in coffee and genetics.

What is CYP1A2, and why should it matter to you?

How you respond to caffeine — whether you’re a fast or slow metabolizer — depends on the version of the CYP1A2 gene you carry.1

Those who are homozygous (i.e., carry two copies) for the CYP1A2*1A allele are rapid caffeine metabolizers. Those who are “slow” metabolizers of caffeine carry the CYP1A2*1F variant of the CYP1A2 gene, meaning that caffeine has a longer half-life in the body.


The CYP1A2 gene codes for (or, it has the instructions for) the cytochrome P450 1A2 enzyme needed by the body to break down caffeine. Lower enzyme production means slower clearance of caffeine from the body, which means you feel the effects for longer.

And what are those effects?

  • Well, the most obvious impact of a longer clearance process for caffeine is a longer caffeine “buzz” and more difficulty sleeping.
  • Lack of sleep, especially if chronic, is no small matter, but there are other health impacts of high caffeine consumption and slow CYP1A2 variants.
  • Research suggests that slow metabolizers of caffeine may have a greater risk of heart attack and high blood pressure, for instance.2

In one study, heavy drinkers of coffee with the slow allele of the gene had three times the risk of hypertension compared to those with the same variant but who didn’t drink coffee.3 (Moderate coffee drinkers had a 72-percent increased risk of hypertension.)

In contrast, those with two copies of the rapid metabolizer allele had a 20-percent reduction in risk compared to non-coffee drinkers with the slow variant, while heavy drinkers had a 64-percent reduction.

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CYP1A2 isn’t the only caffeine-influencing gene to look out for

The ADORA2A gene, for instance, is responsible for making a protein involved in the receptor for adenosine, a neurotransmitter that causes sleepiness. This gene is also linked to caffeine-associated insomnia; variants in ADORA2A that affect production of the adenosine receptor protein may contribute to a significant and chronic lack of sleep.

In one study, a variety of variants of the ADORA2A gene, including C, T, and G allele variants, were associated with changes in total sleep time when consuming caffeine.4 Essentially, caffeine blocks adenosine signals, making it harder to get to sleep and more likely you’ll miss out on deeper, more restorative sleep.

AHR is another gene involved in caffeine metabolism. This gene codes for a protein (the aryl hydrocarbon receptor, AhR) that influences how and when the CYP1A2 gene is switched on and off. The C allele of the AHR gene (which is carried by about 49 percent of the population) is thought to increase the activity of the AHR protein, leading to increased CYP1A2 activity.5

This variation or allele is more often seen in people who drink a lot of coffee, likely because anyone without this allele feels more negative effects from caffeine.6


  • Just as CYP1A2 is the main caffeine-metabolizing enzyme, it’s also involved in drug metabolism, as is AHR.
  • In fact, AHR detects xenobiotics, such as polycyclic aryl hydrocarbons (PAH) found in roasted coffee and other foodstuffs (including burnt meat), and induces transcription of CYP1A1 and CYP1A2.7
  • Coffee is a strong activator of AHR, leading to greater increases in the enzymes that metabolize coffee.8

AHR also detects environmental pollutants — such as dioxins, which are potential contaminants in chlorine-bleached products, air, and wastewater.6

The simple reason why caffeine may (or may not) disrupt your sleep


What’s more, after half the caffeine is cleared, the rest doesn’t clear anywhere near as quickly. The quarter-life of caffeine may be up to twice as long as its half-life; some people could have caffeine lingering in their system up to 22 hours after a single cup of coffee.

If your only cup of coffee is first thing in the morning, and you’re a slow metabolizer, there’s a strong chance you’ll still have some residual caffeine in your system by bedtime. If you also have coffee mid-morning, with lunch, or mid-afternoon, or if you drink multiple cups in the morning, there’s almost certainly going to be some significant effects on your sleep.

The neurotransmitter adenosine makes you sleepy. When you’re awake, adenosine gradually increases every hour, inhibiting wakefulness. During sleep, adenosine levels decrease until you feel sleepy, but caffeine inhibits adenosine, disturbing sleep by blocking the action of adenosine in the brain.

The effects of caffeine on sleep are mostly the result of caffeine binding to and blocking receptors called “adenosine” receptors. And even if you do manage to get to sleep, caffeine’s residual effects can make sleep less restful.9

Caffeine might also cause your body to pump out histamine

There’s not a lot of data on this, but many people with allergies and intolerances, as well as anxiety and sleeplessness, notice that coffee consumption can really make a difference in symptoms. This may be, in part, because caffeine appears to be a “histamine liberator.” This means that drinking coffee may prompt your immune system to release greater levels of histamine.10

There’s just one study, in rats, showing the effects of caffeine on histamine. This study found that histamine levels began rising significantly 30 minutes after caffeine consumption. Levels remained elevated for more than two hours (at least 140 minutes), with effects on neurons in the brain that could contribute to increased wakefulness and alertness.10

Histamine doesn’t just trigger sensitivities. It also acts as a neurostimulant and can increase feelings of anxiousness. Yet another mechanism by which caffeine may cause jitteriness.

If you’re having trouble sleeping, are feeling more anxious than usual, or are experiencing allergy and sensitivity symptoms, it might be worth looking at your recent coffee consumption. Even better, get your genome tested and see if you carry the slow or fast caffeine metabolism variants, or any variants of AHR or ADORA2A

This can give you clues as to how well your body processes caffeine. It can also provide added motivation for kicking the habit, if needed, and opting for a breakfast beverage that works better for your body.


  1. 1. Cornelis MC, Kacprowski T, Menni C, et al. Genome-wide association study of caffeine metabolites provides new insights to caffeine metabolism and dietary caffeine-consumption behavior. Hum Mol Genet. 2016;25(24):5472-5482. doi:10.1093/hmg/ddw334.
  2. 2. Cornelis MC, El-Sohemy A, Kabagambe EK, Campos H. Coffee, CYP1A2 genotype, and risk of myocardial infarction. JAMA. 2006;295(10):1135-1141. doi:10.1001/jama.295.10.1135.
  3. 3. Palatini P, Ceolotto G, Ragazzo F, et al. CYP1A2 genotype modifies the association between coffee intake and the risk of hypertension. J Hypertens. 2009;27(8):1594-1601. doi:10.1097/HJH.0b013e32832ba850.
  4. 4. Erblang M, Drogou C, Gomez-Merino D, et al. The Impact of Genetic Variations in ADORA2A in the Association between Caffeine Consumption and Sleep. Genes (Basel). 2019;10(12):1021. Published 2019 Dec 6. doi:10.3390/genes10121021.
  5. 5. Josse AR, Da Costa LA, Campos H, El-Sohemy A (2012). Associations between polymorphisms in the AHR and CYP1A1-CYP1A2 gene regions and habitual caffeine consumption, American Journal of Clinical Nutrition, 96(3):665-71.
  6. 6. Renda G, Zimarino M, Antonucci I, Tatasciore A, Ruggieri B, Bucciarelli T, Prontera T, Stuppia L, De Caterina R (2012). Genetic determinants of blood pressure responses to caffeine drinking, The American Journal of Clinical Nutrition, 95(1):241-8.
  7. 7. Sulem P, Gudbjartsson DF, Geller F, et al. Sequence variants at CYP1A1-CYP1A2 and AHR associate with coffee consumption. Hum Mol Genet. 2011;20(10):2071-2077. doi:10.1093/hmg/ddr086.
  8. 8. Ishikawa T, Takahashi S, Morita K, Okinaga H, Teramoto T. Induction of AhR-mediated gene transcription by coffee. PLoS One. 2014;9(7):e102152. Published 2014 Jul 9. doi:10.1371/journal.pone.0102152.
  9. 9. Watson EJ, Coates AM, Kohler M, Banks S. Caffeine Consumption and Sleep Quality in Australian Adults. Nutrients. 2016;8(8):479. Published 2016 Aug 4. doi:10.3390/nu8080479.
  10. 10. John Joshi, Kodama Tohru, Siegel Jerome M. Caffeine promotes glutamate and histamine release in the posterior hypothalamus. Am. J. Physiol.-Regul., Integr. Comp. Physiol. 2014;307:R704–R710.
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